CATALIN BARBACIORU PDF

Arashilabar BarbacioruYulei N. PloS one 6 6e BMC microbiology 11 Methods disclosed herein can also be used to diagnose conditions or to support treatment-related decisions. Pharmacokinetic Mapping of Breast Tumors: Email address for updates. A distinct gene expression profile in peripheral blood cells can classify TAA patients from normal individuals. Methods for the determination of a copy number of a target genomic sequence; either a target gene or genomic sequence of interest, in a biological sample are described.

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Email address for updates. BarbacioruEiad B. KeysFrances ChanKaren A. Nature methods 6 5, BarbacioruDaniel J. Sean Walsh, Moraima Pagan. Catalin Barbacioru — The Mathematics Genealogy Project Methods for the determination of a copy number of a target genomic sequence; either a target gene barbaciorh genomic sequence of interest, in a biological sample are described. Using cell-free DNA fragment size to determine copy number variations.

In some embodiments, methods are provided for determining copy number variation of fetuses using maternal samples comprising maternal and fetal cell free DNA. BMC Bioinformatics 9 S-9 Additionally, the methods provide for the determination of a confidence value for a copy number assigned to a sample based on attributes of the sample data.

ShiWendell D. The test sequences are be filtered to remove or negate at least some of the SNPs from the test sequences. In some implementations, one or more fetal fraction estimates are combined with one or more t-statistics to determine copy number variations.

HarrisRoger PerkinsBarbaciorj M. Articles 1—20 Show more. Mathematics Genealogy Project Parallel short sequence mapping for high throughput genome sequencing.

Nature protocols 5 3, WangRoger D. Molecular cancer therapeutics 12 1, The pharmacogenomics journal 5 2, BMC microbiology 11 In some embodiments, methods are provided for determining copy number variation CNV of fetuses using maternal samples comprising maternal and fetal cell free DNA. Sven Duenwald, Cata,in A. For each gene, coverage at each base position across the gene is determined. The following articles are merged in Scholar. Cancer research 64 12, Their combined citations are counted only for the first article.

Nature biotechnology 24 9, cataliin Bmc Bioinformatics 7 1, New citations to this author. Methods of distinguishing ascending from descending TAA are also provided, as are methods of distinguishing familial from sporadic TAA.

Computational Biology Bioinformatics Molecular Diagnostics. SunDavid N. Onur Sakarya, Catalin Barbacioru. The genes provided by the present teachings define a set of diagnostic markers, thus providing a blood-based gene expression test to facilitate early detection of TAA disease. WhitleyJoel P. Cross-contamination of the test sample is determined if the determined contamination level is above a threshold and statistically significant.

Thyroid 14 3, A distinct gene expression profile in peripheral blood cells can classify TAA patients from normal individuals. Related Posts

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CATALIN BARBACIORU PDF

Cross-contamination of the test sample is determined if the determined contamination level is above a threshold and statistically significant. In some implementations, one or more t-statistics obtained from coverage information of the sequence of interest is used to evaluate copy number variations. CowdenCatalin C. Nature biotechnology 24 9, BarbacioruYulei N. Trier 1 Trier 2. The present disclosure provides methods for diagnosis of interstitial lung diseases ILDs. A distinct gene expression profile in peripheral blood cells can classify TAA patients from normal individuals.

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